De novo Antineoplastic Drug Design to Suppress Head, Neck and Oral Cancer using Theoretical Organic and Biochemistry via Comprehensive Molecular Docking and Dynamics

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Özet

Objective: A de novo antineoplastic drug was planned to suppress and modulate the Head, Neck, and Oral Cancer. Methods: Using the computational software tools including molecular docking, molecular dynamics (MD), and post-molecular dynamics bond contact analyses, it has been shown that the new drug called ‘’Innovative Head, Neck, and Oral Cancer Suppressor’’, or simply abbreviated as “IHNOCS” is very effective in terms of suppressing and co-modulating TGF-β and KRTAP2-3 together. Result: The drug suppresses the KRTAP2-3 protein activity while also holding onto TGF-β and modulating it to slow down and halt the metastasis. Conclusion: We have effectively created a novel medication using principles of theoretical chemistry, biochemistry, pharmaceutical chemistry and organic chemistry and organic chemistry to inhibit Head, Neck, and Oral Cancer. This medication should further undergo experimental testing in various stages, including in vitro, in vivo, and human clinical phases. It exhibits significant effectiveness in inhibiting the progression of cancer by simultaneously targeting TGF-β and KRTAP2-3, thereby impeding metastasis and suppressing the disease. This work is licensed under a Creative Commons Attribution-Non Commercial 4.0 International License.

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AlanDeğerDil
dc.contributor.authorAgar, Soykan
dc.contributor.authorMokhtari, Mohaddeseh
dc.contributor.authorYanik, Muhammed
dc.contributor.authorAkkurt, Barbaros
dc.contributor.authorUlukaya, Engin
dc.contributor.authorTerzi, Rabia
dc.date.accessioned2026-10-27T23:47:36.188931308Z
dc.date.available2026-10-27T23:47:36.188931308Z
dc.date.issued2024
dc.description.abstractObjective: A de novo antineoplastic drug was planned to suppress and modulate the Head, Neck, and Oral Cancer. Methods: Using the computational software tools including molecular docking, molecular dynamics (MD), and post-molecular dynamics bond contact analyses, it has been shown that the new drug called ‘’Innovative Head, Neck, and Oral Cancer Suppressor’’, or simply abbreviated as “IHNOCS” is very effective in terms of suppressing and co-modulating TGF-β and KRTAP2-3 together. Result: The drug suppresses the KRTAP2-3 protein activity while also holding onto TGF-β and modulating it to slow down and halt the metastasis. Conclusion: We have effectively created a novel medication using principles of theoretical chemistry, biochemistry, pharmaceutical chemistry and organic chemistry and organic chemistry to inhibit Head, Neck, and Oral Cancer. This medication should further undergo experimental testing in various stages, including in vitro, in vivo, and human clinical phases. It exhibits significant effectiveness in inhibiting the progression of cancer by simultaneously targeting TGF-β and KRTAP2-3, thereby impeding metastasis and suppressing the disease. This work is licensed under a Creative Commons Attribution-Non Commercial 4.0 International License.
dc.description.sponsorshipKocaeli Health and Technology University
dc.identifier.doi10.31557/apjcp.2024.25.8.2905
dc.identifier.endpage2909
dc.identifier.issn1513-7368
dc.identifier.issue8
dc.identifier.pmcidPMC11495462
dc.identifier.pmid39205589
dc.identifier.scopus2-s2.0-85202783463
dc.identifier.startpage2905
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/kostu/10515
dc.identifier.volume25
dc.language.isoen
dc.publisherAsian Pacific Organization for Cancer Prevention
dc.relation.ispartofAsian Pacific Journal of Cancer Prevention
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectDe novo in silico Drug Design
dc.subjectHead
dc.subjectKRTAP 2–3
dc.subjectMolecular Docking
dc.subjectNeck
dc.subjectOral Cancer
dc.subjectTGF-β
dc.subject.otherAntineoplastic Agents
dc.subject.otherDrug Design
dc.subject.otherHead and Neck Neoplasms
dc.subject.otherHumans
dc.subject.otherMolecular Docking Simulation
dc.subject.otherMolecular Dynamics Simulation
dc.subject.otherMouth Neoplasms
dc.subject.otherTransforming Growth Factor beta
dc.subject.otherantineoplastic agent
dc.subject.otherchemistry
dc.subject.otherdrug therapy
dc.subject.otherhead and neck tumor
dc.subject.otherhuman
dc.subject.othermetabolism
dc.subject.othermolecular docking
dc.subject.othermolecular dynamics
dc.subject.othermouth tumor
dc.subject.otherpathology
dc.titleDe novo Antineoplastic Drug Design to Suppress Head, Neck and Oral Cancer using Theoretical Organic and Biochemistry via Comprehensive Molecular Docking and Dynamics
dc.typeArticle
rdl.citation.openalex4
rdl.citation.scopus4
rdl.departmentKocaeli Health and Technology University, Faculty of Pharmacy, Kocaeli 41275, Türkiye
rdl.departmentGraduate Software System Manager, Vocational School of Computer Programming, Ankara University, Ankara, Türkiye
rdl.departmentIstanbul Technical University, Faculty of Science and Letters, Department of Chemistry, Istanbul, Türkiye
rdl.departmentIstinye University Medical Faculty, Clinical Biochemistry Department, Istanbul, Türkiye
rdl.departmentKocaeli Health and Technology University, Faculty of Health Sciences, Kocaeli 41275, Türkiye
rdl.oa.statusgold
rdl.oa.statusgreen
rdl.oa.urlhttps://journal.waocp.org/article_91281_73383c924dcf61a9579596314f375df2.pdf
rdl.scopus.quartileQ2
rdl.sdgSDG03
rdl.source.indexSCOPUS
rdl.source.indexPUBMED