Inhibition of pancreatic cancer via LPAR4 receptor with a de novo drug complex design using theoretical organic chemistry: Comprehensive molecular docking, molecular dynamics

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Özet

The present work relates to a de novo organic chemistry involved drug design and repurposing discovery of a Quercetin and Ascorbic Acid complex formation with the IUPAC nomenclature of ‘’3-((2S)-2-(3,4-dihydroxy-5-oxo-2,5-dihydrofuran-2-yl)-2-hydroxyethoxy)-2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxychroman-4-one’’ to suppress pancreatic cancer via the inhibition of LPAR4 receptor. This was achieved with molecular docking and molecular dynamics studies and found that Ascorbic Acid is docking manoeuvre assistant for Quercetin to form Hydrogen bonds and Covalent bonds to shut down LPAR4 receptor with excellent inhibition constant. This study may very well lead to further in vitro organic synthesis, characterization and cell line results and in vivo/ex ovo animal testing for etherical bound Quercetin and Ascorbic Acid complex.

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RDL Kalıcı Bağlantı (PID)
https://rdlopen.rawdatalibrary.net/r/kostu/10561Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.29228/jrp.785Yayıncı resmi DOI adresi
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OpenAlex
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Tam Kayıt
AlanDeğerDil
dc.contributor.authorAgar, Soykan
dc.contributor.authorArasan, Yaren
dc.contributor.authorAkkurt, Barbaros
dc.contributor.authorUlukaya, Engin
dc.date.accessioned2026-10-27T23:47:38.333748590Z
dc.date.available2026-10-27T23:47:38.333748590Z
dc.date.issued2024
dc.description.abstractThe present work relates to a de novo organic chemistry involved drug design and repurposing discovery of a Quercetin and Ascorbic Acid complex formation with the IUPAC nomenclature of ‘’3-((2S)-2-(3,4-dihydroxy-5-oxo-2,5-dihydrofuran-2-yl)-2-hydroxyethoxy)-2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxychroman-4-one’’ to suppress pancreatic cancer via the inhibition of LPAR4 receptor. This was achieved with molecular docking and molecular dynamics studies and found that Ascorbic Acid is docking manoeuvre assistant for Quercetin to form Hydrogen bonds and Covalent bonds to shut down LPAR4 receptor with excellent inhibition constant. This study may very well lead to further in vitro organic synthesis, characterization and cell line results and in vivo/ex ovo animal testing for etherical bound Quercetin and Ascorbic Acid complex.
dc.description.sponsorshipKocaeli Health and Technology University infrastructure, supercomputers and Assistant Professor Soykan Agar at the faculty of Pharmacy
dc.identifier.doi10.29228/jrp.785
dc.identifier.eissn2630-6344
dc.identifier.endpage1040
dc.identifier.issn2630-6344
dc.identifier.issue4
dc.identifier.scopus2-s2.0-85202205885
dc.identifier.startpage1033
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/kostu/10561
dc.identifier.volume28
dc.identifier.wosWOS:001288934400012
dc.language.isoen
dc.publisherMarmara University
dc.relation.ispartofJournal of Research in Pharmacy
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectAscorbic Acid
dc.subjectin silico drug design and repurposing
dc.subjectLPAR4
dc.subjectMolecular Docking
dc.subjectMolecular Dynamics
dc.subjectPancreatic Cancer
dc.subjectQuercetin
dc.subjectVitamin C
dc.subject.classificationPharmacology & Pharmacy
dc.subject.other3 [2 (3,4 dihydroxy 5 oxo 2,5 dihydrofuran 2 yl) 2 hydroxyethoxy] 2 (3,4 dihydroxyphenyl) 3,5,7 trihydroxychroman 4 one
dc.subject.otherantineoplastic agent
dc.subject.otherascorbic acid
dc.subject.otherligand
dc.subject.otherlysophosphatidic acid receptor
dc.subject.otherlysophosphatidic acid receptor 4
dc.subject.otherquercetin
dc.subject.otherunclassified drug
dc.subject.otherantineoplastic activity
dc.subject.otherArticle
dc.subject.othercancer inhibition
dc.subject.othercomplex formation
dc.subject.othercomputer model
dc.subject.othercovalent bond
dc.subject.otherdensity functional theory
dc.subject.otherdrug design
dc.subject.otherdrug repositioning
dc.subject.otherdrug structure
dc.subject.otherdrug synthesis
dc.subject.otherhydrogen bond
dc.subject.otherin vitro study
dc.subject.otherinhibition constant
dc.subject.othermolecular docking
dc.subject.othermolecular dynamics
dc.subject.otherorganic chemistry
dc.subject.otherorganic synthesis
dc.subject.otherpancreas cancer
dc.subject.otherproton nuclear magnetic resonance
dc.subject.otherstatic electricity
dc.titleInhibition of pancreatic cancer via LPAR4 receptor with a de novo drug complex design using theoretical organic chemistry: Comprehensive molecular docking, molecular dynamics
dc.typeArticle
rdl.citation.openalex3
rdl.citation.scopus1
rdl.citation.trdizin3
rdl.citation.wos0
rdl.oa.statusgold
rdl.oa.urlhttps://doi.org/10.29228/jrp.785
rdl.scopus.quartileQ3
rdl.sdgSDG03
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.source.indexTRDIZIN
rdl.wos.indexEmerging Sources Citation Index (ESCI)